Jayden

This procedure is based on M1 Mac.

1. Download the source code and extract:

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   wget http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz && tar -xzvf clustal-omega-1.2.4.tar.gz && cd clustal-omega-1.2.4
   

2. Install argtable with Homebrew:

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   # You need install the Homebrew first if you haven't installed it.
   /bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
   
   brew install argtable
   

3. Compile and install:

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   ./configure CFLAGS='-I/opt/homebrew/Cellar/argtable/2.13/include' LDFLAGS='-L/opt/homebrew/Cellar/argtable/2.13/lib'
   make
   make install 
   

4. Check the installation:

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   which clustalo
   

5. Then you can use it with:

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   cd /path/to/your/sequence
   clustalo -i sequence.fasta -o output.fasta --seqtype=protein
   

此文由 Mix Space 同步更新至 xLog
原始链接为 https://xxu.do/posts/academic/Install-Clustal-Omega-from-source-code